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| Interface to PDBFinderII |
This plugin lets the user select residues,
retrieves the PDBFinderII entry for the corresponding PDB file via HTTP and then colors the residues based on a selected property: sequence entropy/conservation,
hotspots for insertions/deletions and lots of different quality indicators. The color gradient goes from blue
(unimportant,perfect) over magenta and red (interesting,allright) to yellow (very important to look at,probably wrong). Grey indicates that no data are available. Click View
> Color > Residue by feature Written by: Elmar Krieger
License: GPL (www.gnu.org)
Last modified: 2007/11/26
This plugin queries the Molecular Class Specific Information System
(www.cmbi.kun.nl/mcsis) for mutations in a protein, highlights the residues and gives a summary of the mutation effects. Note that this requires the MCSIS database to be installed locally. Since MCSIS development has been paused,
this is currently not possible, this plugin therefore mainly serves as an example for similar applications.
Written by: Emmanuel Bettler
License: GNU GPL Last modified: 2007/07/05
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Retrieve a PDB file by FTP |
This plugin asks for a PDB ID and retrieves the file from www.rcsb.org. Click File
> Get by FTP. Written by: Elmar Krieger
License: GNU GPL Last modified:
2007/04/01 | 
